Using the NONCODE Database Resource

doi:10.1002/cpbi.25

科研成果详情

题名	Using the NONCODE Database Resource
作者	Li Xiyuan 1,2; Bu Dechao 1,3; Sun Liang4,5,6; Wu Yang 4; Fang Shuangsang 1; Li Hui 1; Luo Haitao 1; Luo Chunlong 1; Fang Wenzheng 1; Chen Runsheng 7; Zhao Yi 1,3
发表日期	2017-06-27
发表期刊	Current protocols in bioinformatics 影响因子和分区
语种	英语
原始文献类型	Article
关键词	NONCODE database bioinformatics functional annotation information retrieval long non-coding RNA species conservation.
摘要	NONCODE is a comprehensive database that aims to present the most complete collection and annotation of non-coding RNAs, especially long non-coding RNAs (lncRNA genes), and thus NONCODE is essential to modern biological and medical research. Scientists are producing a flood of new data from which new lncRNA genes and lncRNA-disease relationships are continually being identified. NONCODE assimilates such information from a wide variety of sources including published articles, RNA-seq data, micro-array data and databases on genetic variation (dbSNP) and genome-wide associations (GWAS). NONCODE organizes all this information and makes it freely available to the public via the Internet. The NONCODE protocol provides step-by-step instructions on how to browse and search lncRNA information such as sequence, expression, and disease relationships, how to use the tools for functional prediction, species conservation assays, blast analysis, identifier conversion, and, finally, how to submit sequences to identify lncRNA genes. As of Dec 2016, NONCODE has cataloged 487,851 lncRNA genes sequenced from 16 species. © 2017 by John Wiley & Sons, Inc.
资助项目	National Natural Science Foundation of China[31371320];
出版者	John Wiley and Sons Inc.P.O.Box 18667NewarkNJ 07191-8667
ISSN	1934-3396
EISSN	1934-340X
卷号	58 页码:12.16.1-12.16.19.
DOI	10.1002/cpbi.25
收录类别	PUBMED ; SCOPUS
URL	查看原文
PubMed ID	28654727
SCOPUSEID	2-s2.0-85029406034
Scopus学科分类	Structural Biology;Biochemistry
引用统计
文献类型	期刊论文
条目标识符	https://kms.wmu.edu.cn/handle/3ETUA0LF/33080
专题	检验医学院（生命科学学院、生物学实验教学中心）_基础检验学系
作者单位	1.Institute of Computing Technology Chinese Academy of Sciences, Bioinformatics Research Group, Advanced Computing Research Laboratory, Beijing, China.; 2.Beijing Zhongke Jingyun Technology Company Ltd, Medicine. Beijing, China.; 3.Chinese Academy of Sciences, LuoYang Branch of Institute of Computing Technology, Beijing, China.; 4.Chinese Academy of Sciences, Institute of Computing Technology, Bioinformatics Research Group, Advanced Computing Research Laboratory, Beijing, China.; 5.Beijing Zhongke Jingyun Technology Company Ltd, Bioinformatics, Beijing, China.; 6.Wenzhou Medical University, College of Laboratory Medicine and Life Sciences, Department of Laboratory Medicine, Beijing, China.; 7.Institute of Biophysics, Chinese Academy of Sciences, CAS Key Laboratory of RNA Biology, Beijing, China.
推荐引用方式 GB/T 7714	Li Xiyuan,Bu Dechao,Sun Liang,et al. Using the NONCODE Database Resource[J]. Current protocols in bioinformatics,2017,58:12.16.1-12.16.19..
APA	Li Xiyuan., Bu Dechao., Sun Liang., Wu Yang., Fang Shuangsang., ... & Zhao Yi. (2017). Using the NONCODE Database Resource. Current protocols in bioinformatics, 58, 12.16.1-12.16.19..
MLA	Li Xiyuan,et al."Using the NONCODE Database Resource".Current protocols in bioinformatics 58(2017):12.16.1-12.16.19..