科研成果详情

题名Comprehensive analysis of circular RNA-associated competing endogenous RNA networks and immune infiltration in gastric cancer
作者
发表日期2023-04
发表期刊Transplant immunology   影响因子和分区
语种英语
原始文献类型Journal Article
关键词Competitive endogenous RNA Gastric cancer Immune infiltrates circRNA
其他关键词SEMAPHORIN 5A ; INVASION ; MACROPHAGES ; METASTASIS ; PROTEINS ; CONTRIBUTES ; EXPRESSION ; MIGRATION ; MOLECULE ; SURVIVAL
摘要

Circular RNA (circRNA) has been proved to be an important regulator of gastric cancer (GC). However, the role and regulatory mechanism of circrna related competitive endogenous RNA (ceRNA) in GC have not been established., CircRNA data and clinical data were obtained from the GEO and TCGA databases. The ceRNA networks were constructed and a function enrichment analysis was completed. Additionally, correlations between hub genes expression, immune cell infiltration, and clinical phenotypes were determined. The differentially expressed circRNAs and their downstream microRNAs (miRNAs) were validated by quantitative real-time polymerase chain reaction, and the hub genes were validated by western blot analysis. The migration and invasion ability of overexpressed hsa_circ_0002504 was determined by a transwell assay., The ceRNA network contained 2 circRNAs, 3 miRNAs, and 55 messenger RNAs (mRNAs). 323 biological processes terms, 53 cellular components terms, 51 molecular functions terms, and 4 signaling pathways were revealed by the function enrichment analysis. The GSEA analysis revealed that the hub genes were positively correlated with the axon guidance and adhesion molecules pathways. The correlation analysis revealed that overexpressed EPHA4 and KCNA1 indicated poor tissue differentiation and were associated with clinically advanced stages of GC. The in vitro experiments showed that hsa_circ_0002504 was significantly down-regulated in GC cell lines. In addition, the overexpression of hsa_circ_0002504 led to a significant downregulation of hsa-miR-615-5p and hsa-miR-767-5p, as well as an upregulation of EPHA4, KCNA1, and NCAM1. Furthermore, it suppressed the migration and invasion ability of GC cells., Hsa_circ_0002504 is a potential diagnostic biomarker for GC. High expression of EPHA4 and KCNA1 may indicate poor prognosis.

资助项目Science and Technology Bureau of Wenzhou city [Y20220875]
出版者ELSEVIER
ISSN0966-3274
EISSN1878-5492
卷号77
DOI10.1016/j.trim.2023.101793
页数12
WOS类目Immunology ; Transplantation
WOS研究方向Immunology ; Transplantation
WOS记录号WOS:000990959600001
收录类别SCIE ; PUBMED ; SCOPUS
在线发表日期2023-02
URL查看原文
PubMed ID36773765
SCOPUSEID2-s2.0-85148749174
通讯作者地址[Wang, Xiu-yan]Department of Gastroenterology,Wenzhou Third Clinical Institute Affiliated to Wenzhou Medical University,The Third Affiliated Hospital of Shanghai University,Wenzhou People's Hospital,No. 57 Cang Hou Street, Zhejiang,Wenzhou,325000,China
Scopus学科分类Immunology and Allergy;Immunology;Transplantation
引用统计
文献类型期刊论文
条目标识符https://kms.wmu.edu.cn/handle/3ETUA0LF/172947
专题其他_附属第三医院(瑞安市人民医院)
通讯作者Wang, Xiu-yan
作者单位
1.Department of Gastroenterology,The Third Affiliated Hospital of Shanghai University,Wenzhou People's Hospital,Wenzhou Third Clinical Institute Affiliated to Wenzhou Medical University,Zhejiang,Wenzhou,325000,China;
2.Soochow University,Jiangsu,Suzhou,215000,China;
3.Department of Gastroenterology,Zhejiang Provincial People's Hospital,Hangzhou,Zhejiang,310000,China;
4.Department of General Surgery,Wenzhou Third Clinical Institute Affiliated to Wenzhou Medical University,The Third Affiliated Hospital of Shanghai University,Wenzhou People's Hospital,Zhejiang,Wenzhou,325000,China;
5.Zhejiang University of Technology,Hangzhou,Zhejiang,310000,China
第一作者单位其他_附属第三医院(瑞安市人民医院)
通讯作者单位其他_附属第三医院(瑞安市人民医院)
第一作者的第一单位其他_附属第三医院(瑞安市人民医院)
推荐引用方式
GB/T 7714
Xu, Bei-bei,Sun, Hao-yue,Huang, Yi,et al. Comprehensive analysis of circular RNA-associated competing endogenous RNA networks and immune infiltration in gastric cancer[J]. Transplant immunology,2023,77.
APA Xu, Bei-bei., Sun, Hao-yue., Huang, Yi., Zheng, En-dian., Zheng, Liang., ... & Yu, Ying-cong. (2023). Comprehensive analysis of circular RNA-associated competing endogenous RNA networks and immune infiltration in gastric cancer. Transplant immunology, 77.
MLA Xu, Bei-bei,et al."Comprehensive analysis of circular RNA-associated competing endogenous RNA networks and immune infiltration in gastric cancer".Transplant immunology 77(2023).

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