题名 | Comprehensive analysis of circular RNA-associated competing endogenous RNA networks and immune infiltration in gastric cancer |
作者 | |
发表日期 | 2023-04 |
发表期刊 | Transplant immunology 影响因子和分区 |
语种 | 英语 |
原始文献类型 | Journal Article |
关键词 | Competitive endogenous RNA Gastric cancer Immune infiltrates circRNA |
其他关键词 | SEMAPHORIN 5A ; INVASION ; MACROPHAGES ; METASTASIS ; PROTEINS ; CONTRIBUTES ; EXPRESSION ; MIGRATION ; MOLECULE ; SURVIVAL |
摘要 | Circular RNA (circRNA) has been proved to be an important regulator of gastric cancer (GC). However, the role and regulatory mechanism of circrna related competitive endogenous RNA (ceRNA) in GC have not been established., CircRNA data and clinical data were obtained from the GEO and TCGA databases. The ceRNA networks were constructed and a function enrichment analysis was completed. Additionally, correlations between hub genes expression, immune cell infiltration, and clinical phenotypes were determined. The differentially expressed circRNAs and their downstream microRNAs (miRNAs) were validated by quantitative real-time polymerase chain reaction, and the hub genes were validated by western blot analysis. The migration and invasion ability of overexpressed hsa_circ_0002504 was determined by a transwell assay., The ceRNA network contained 2 circRNAs, 3 miRNAs, and 55 messenger RNAs (mRNAs). 323 biological processes terms, 53 cellular components terms, 51 molecular functions terms, and 4 signaling pathways were revealed by the function enrichment analysis. The GSEA analysis revealed that the hub genes were positively correlated with the axon guidance and adhesion molecules pathways. The correlation analysis revealed that overexpressed EPHA4 and KCNA1 indicated poor tissue differentiation and were associated with clinically advanced stages of GC. The in vitro experiments showed that hsa_circ_0002504 was significantly down-regulated in GC cell lines. In addition, the overexpression of hsa_circ_0002504 led to a significant downregulation of hsa-miR-615-5p and hsa-miR-767-5p, as well as an upregulation of EPHA4, KCNA1, and NCAM1. Furthermore, it suppressed the migration and invasion ability of GC cells., Hsa_circ_0002504 is a potential diagnostic biomarker for GC. High expression of EPHA4 and KCNA1 may indicate poor prognosis. |
资助项目 | Science and Technology Bureau of Wenzhou city [Y20220875] |
出版者 | ELSEVIER |
ISSN | 0966-3274 |
EISSN | 1878-5492 |
卷号 | 77 |
DOI | 10.1016/j.trim.2023.101793 |
页数 | 12 |
WOS类目 | Immunology ; Transplantation |
WOS研究方向 | Immunology ; Transplantation |
WOS记录号 | WOS:000990959600001 |
收录类别 | SCIE ; PUBMED ; SCOPUS |
在线发表日期 | 2023-02 |
URL | 查看原文 |
PubMed ID | 36773765 |
SCOPUSEID | 2-s2.0-85148749174 |
通讯作者地址 | [Wang, Xiu-yan]Department of Gastroenterology,Wenzhou Third Clinical Institute Affiliated to Wenzhou Medical University,The Third Affiliated Hospital of Shanghai University,Wenzhou People's Hospital,No. 57 Cang Hou Street, Zhejiang,Wenzhou,325000,China |
Scopus学科分类 | Immunology and Allergy;Immunology;Transplantation |
引用统计 | |
文献类型 | 期刊论文 |
条目标识符 | https://kms.wmu.edu.cn/handle/3ETUA0LF/172947 |
专题 | 其他_附属第三医院(瑞安市人民医院) |
通讯作者 | Wang, Xiu-yan |
作者单位 | 1.Department of Gastroenterology,The Third Affiliated Hospital of Shanghai University,Wenzhou People's Hospital,Wenzhou Third Clinical Institute Affiliated to Wenzhou Medical University,Zhejiang,Wenzhou,325000,China; 2.Soochow University,Jiangsu,Suzhou,215000,China; 3.Department of Gastroenterology,Zhejiang Provincial People's Hospital,Hangzhou,Zhejiang,310000,China; 4.Department of General Surgery,Wenzhou Third Clinical Institute Affiliated to Wenzhou Medical University,The Third Affiliated Hospital of Shanghai University,Wenzhou People's Hospital,Zhejiang,Wenzhou,325000,China; 5.Zhejiang University of Technology,Hangzhou,Zhejiang,310000,China |
第一作者单位 | 其他_附属第三医院(瑞安市人民医院) |
通讯作者单位 | 其他_附属第三医院(瑞安市人民医院) |
第一作者的第一单位 | 其他_附属第三医院(瑞安市人民医院) |
推荐引用方式 GB/T 7714 | Xu, Bei-bei,Sun, Hao-yue,Huang, Yi,et al. Comprehensive analysis of circular RNA-associated competing endogenous RNA networks and immune infiltration in gastric cancer[J]. Transplant immunology,2023,77. |
APA | Xu, Bei-bei., Sun, Hao-yue., Huang, Yi., Zheng, En-dian., Zheng, Liang., ... & Yu, Ying-cong. (2023). Comprehensive analysis of circular RNA-associated competing endogenous RNA networks and immune infiltration in gastric cancer. Transplant immunology, 77. |
MLA | Xu, Bei-bei,et al."Comprehensive analysis of circular RNA-associated competing endogenous RNA networks and immune infiltration in gastric cancer".Transplant immunology 77(2023). |
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